Stripe × Fulfil

Stripe integration

Automatic reconciliation,
and direct payment capture.

Stripe payouts reconcile against Shopify payments automatically. Capture credit cards directly in Fulfil for wholesale orders, or send payment links to customers.

FAQ

Questions? Answers.

How does Fulfil reconcile Stripe payments?
Fulfil imports your Stripe payouts automatically, along with the balance transactions inside them. Customer payments auto-reconcile by matching the amount, reference number, and GL account to the payment gateway transaction imported from your sales channel, with no journal entry needed. The payout deposit into your bank is reconciled with a bank rule set to Transfer.
What data flows between Fulfil and Stripe?
Fulfil connects to Stripe through Stripe Connect OAuth and imports payout settlements plus the individual balance transactions, each with its processing fees. To charge and refund customer credit cards directly from Fulfil, you set Stripe up as a payment gateway (Provider Stripe, Method Credit Card - Stripe) using your publishable and API keys.
Can I capture credit cards for wholesale orders in Fulfil?
Yes. Once Stripe is configured as a payment gateway, you can capture credit cards directly in Fulfil for wholesale orders, phone orders, and manual transactions. You add the specific Fulfil users who are allowed to charge and refund cards through that gateway.
How do Stripe payment links work?
You generate a payment link that customers can pay online, and the payment syncs back to the originating order in Fulfil automatically. This is useful for B2B invoices and phone orders where you are not capturing the card yourself.
When are cards charged?
You choose the charge timing. Cards can be charged at order confirmation or when the order ships, and you set this per channel or per customer. That gives you control over authorization and capture rather than a single fixed rule.
How are Stripe processing fees handled?
Fees import with each balance transaction. When you configure a Fees Account on your Stripe bank, Fulfil books the fees automatically as the settlement imports, debiting your fees expense account and crediting the Stripe bank account. Without a Fees Account, you record the fees manually.

Agentic ERP

Run it with your own AI agents.

Fulfil is an agentic ERP. Point an AI agent like Claude Code or Cursor at the CLI to reconcile Stripe payouts & fees, or automate multi-step finance work end to end.

Automate your
Stripe reconciliation.

See how Fulfil handles payouts, fees, and wholesale capture in one workflow.